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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9539724_9541121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9539724 - 9541121

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAA

U12 Branch Point Sequence:

TTTCTGGTAACC

Flanking Amino Acid:

QSSLSFSCEPGYNLIGTRTS

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.1

39.5

Major BPS

0.32

1.1

54.3

41.1

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

34.5

-1.8

3.2

41.9

44.5

Minor BPS

47.7

-0.1

2.6

71.01

40.5

Associated Gene:

Gene:

APOH

Ensembl Gene ID:

ENSAPLG00000010266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033773

9538073 - 9543440

5368

ENSAPLT00000010709

9538073 - 9544183

6111