Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_9867118_9868293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9867118 - 9868293

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGGTGT

5'SS Class:

major

3'SS Sequence:

TTTCTCCTAGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAA

U12 Branch Point Sequence:

CAGCCCATAACA

Flanking Amino Acid:

QTHIYMLMKKDSYGRYLKSP

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.2

64.2

42.2

Major BPS

0.08

61.4

34.3

Major PPT

77.7

0.62

0.8

75.1

28.5

Minor 5ss

40.9

-1

3.1

56.7

47.5

Minor BPS

56.2

0.19

1.7

63.27

42.4

Associated Gene:

Gene:

RGS9

Ensembl Gene ID:

ENSAPLG00000011394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027941

9860321 - 9892037

31717

ENSAPLT00000026953

9860321 - 9875186

14866

ENSAPLT00000012020

9860321 - 9892037

31717