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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9868433_9868957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9868433 - 9868957

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CACTTGTTAATG

Flanking Amino Acid:

KVKEKAEEIYKLFLAPGARR

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

84.4

0.85

34.5

Major PPT

82.2

0.72

0.7

76.4

25.7

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

-0.2

2.1

51.1

44.1

Associated Gene:

Gene:

RGS9

Ensembl Gene ID:

ENSAPLG00000011394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027941

9860321 - 9892037

31717

ENSAPLT00000026953

9860321 - 9875186

14866

ENSAPLT00000012020

9860321 - 9892037

31717