Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_9873642_9878938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9873642 - 9878938

Intron Length:

5297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCAG

5'SS Class:

major

3'SS Sequence:

CTTTATGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTTTCTTTATGT

Flanking Amino Acid:

DRATDPNENKKKTMDVYRRE

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

62.1

44.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

82.2

0.72

0.9

75.8

37.8

Minor 5ss

36.6

-1.5

3.1

46.7

48.6

Minor BPS

61.1

0.43

1.9

80.3

41.9

Associated Gene:

Gene:

RGS9

Ensembl Gene ID:

ENSAPLG00000011394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027941

9860321 - 9892037

31717

ENSAPLT00000012020

9860321 - 9892037

31717