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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9897938_9899622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9897938 - 9899622

Intron Length:

1685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CATGTTGTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GAAATCCTAATT

Flanking Amino Acid:

RATIYSNVIKGVRVLVDARE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

81.5

32.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

63.9

0.31

1.2

62.8

42.1

Minor 5ss

32.1

-2

3.5

48.8

47.4

Minor BPS

49.6

0.05

1.7

64.42

39.4

Associated Gene:

Gene:

GNA13

Ensembl Gene ID:

ENSAPLG00000030399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026581

9897655 - 9925314

27660