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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9899850_9917372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9899850 - 9917372

Intron Length:

17523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TGCTTATTAACT

Flanking Amino Acid:

AYDRRREFQLGESVKYFLDN

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.76

0.8

76.9

37.3

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

68.2

0.65

1.6

81.55

39.8

Associated Gene:

Gene:

GNA13

Ensembl Gene ID:

ENSAPLG00000030399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026581

9897655 - 9925314

27660