Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_9982621_9983033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9982621 - 9983033

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCGCCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

AAAAGCTCAGCT

Flanking Amino Acid:

CRLHGSPKPPGLCALSINHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.6

31.9

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

68.1

0.41

60.9

40.2

Minor 5ss

-1.6

3.2

49.9

46.5

Minor BPS

42.8

-0.4

2.1

58.18

43.9

Associated Gene:

Gene:

WIPI1

Ensembl Gene ID:

ENSAPLG00000009001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033157

9974402 - 9983353

8952

ENSAPLT00000009381

9975476 - 9983353

7878