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Intron Name: Anas_platyrhynchos_platyrhynchos_1_101163493_101180308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101163493 - 101180308

Intron Length:

16816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTGCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TGTGGTATACAT

Flanking Amino Acid:

LTDMDLQYSWFSCKPVAVKH

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

74.9

0.62

81.3

29.9

Major PPT

76.8

0.6

0.9

77.1

37.1

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

-0.7

2.2

58.3

44.7

Associated Gene:

Gene:

SAMSN1

Ensembl Gene ID:

ENSAPLG00000006805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020418

101128400 - 101182083

53684

ENSAPLT00000027483

101128400 - 101185439

57040