Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_1013693_1013931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1013693 - 1013931

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTTTA

5'SS Class:

major

3'SS Sequence:

TTTTCTGTACCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TTTTCTGTACCA

Flanking Amino Acid:

TLPDLQSRTGPEHVWAIITA

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

38.1

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

0.68

0.9

74.2

40.2

Minor 5ss

41.9

-0.9

3.1

48.8

47.3

Minor BPS

57.5

0.23

2.2

78.6

38.6

Associated Gene:

Gene:

FBH1

Ensembl Gene ID:

ENSAPLG00000009754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010201

1009974 - 1030196

20223