Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_101703405_101704125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101703405 - 101704125

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

ACTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CTTGTGCTAACA

Flanking Amino Acid:

DAFQIKAEEERDGEKPKNPM

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

80.2

0.68

0.9

76.7

36.8

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

45.5

-0.3

2.4

62.87

43.8

Associated Gene:

Gene:

USP25

Ensembl Gene ID:

ENSAPLG00000014057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039279

101682408 - 101737646

55239

ENSAPLT00000024187

101682408 - 101737646

55239

ENSAPLT00000014755

101682408 - 101737209

54802

ENSAPLT00000047435

101682408 - 101737646

55239