Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_101724435_101727785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101724435 - 101727785

Intron Length:

3351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAACTA

5'SS Class:

major

3'SS Sequence:

TAAAATTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAA

Flanking Amino Acid:

RCGPEAGFFKAIKLEYARLL

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

65.2

40.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.8

0.29

59.7

45.4

Minor 5ss

33.8

-1.8

3.5

47.8

47.6

Minor BPS

66.6

0.52

1.3

71.49

33.9

Associated Gene:

Gene:

USP25

Ensembl Gene ID:

ENSAPLG00000014057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024187

101682408 - 101737646

55239

ENSAPLT00000014755

101682408 - 101737209

54802