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Intron Name: Anas_platyrhynchos_platyrhynchos_1_101910940_101958812_F

Intron Information:

Intron Rank:

126471

Intron Class:

major

Intron Phase:

Intron Coordinates:

101910940 - 101958812

Intron Length:

47873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

ACTCCATTATAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

38.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

83.8

0.76

0.8

81.2

36.5

Minor 5ss

37.3

-1.4

2.8

50.6

45.6

Minor BPS

46.5

-0.2

1.9

57.08

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025874

101885571 - 101958938

73368