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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102001300_102032829_F

Intron Information:

Intron Rank:

145725

Intron Class:

major

Intron Phase:

Intron Coordinates:

102001300 - 102032829

Intron Length:

31530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

CTTCCTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

80.3

0.68

0.8

76.5

30.6

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

77.5

0.86

1.2

80.59

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029566

101993792 - 102033384

39593