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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102233320_102284075_F

Intron Information:

Intron Rank:

123631

Intron Class:

major

Intron Phase:

Intron Coordinates:

102233320 - 102284075

Intron Length:

50756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TTGTGTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TAGTGCTTATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

83.6

0.76

0.8

81.3

36.4

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

49.4

0.03

2.1

70.37

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040889

102233094 - 102284193

51100