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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102302739_102303186_R


Intron Information:

Intron Rank:
130839

Intron Class:
major-like

Intron Phase:

Intron Coordinates:
102302739 - 102303186

Intron Length:
448

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTATATATT

5'SS Class:
weak_major

3'SS Sequence:
CTTTAATAAACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
ACATCTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.8
0.26
1.1
69.8
40.3

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
68.1
0.41
1
63.2
41

Minor 5ss
49.1
-0.1
2.7
68.7
42.2

Minor BPS
71.5
0.67
1.1
70.19
36.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

102282021 - 102303251
21231