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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1023176_1023724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1023176 - 1023724

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CCCTGGCTAACT

Flanking Amino Acid:

NKTLVGGNQEGDVRGSVKGK

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

82.8

0.74

0.8

80.1

31.8

Minor 5ss

45.1

-0.5

2.9

56.3

47.9

Minor BPS

41.4

-0.5

2.6

59.61

49.5

Associated Gene:

Gene:

FBH1

Ensembl Gene ID:

ENSAPLG00000009754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010201

1009974 - 1030196

20223