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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102396474_102408943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102396474 - 102408943

Intron Length:

12470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

GQNQTFASSKYGIAHKIGDI

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

40.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

37.1

-1.5

3.4

50.2

46.2

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045022

102375724 - 102409525

33802

ENSAPLT00000028158

102382368 - 102409525

27158