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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102630732_102633622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102630732 - 102633622

Intron Length:

2891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTAATGAGAACT

Flanking Amino Acid:

DQYHIIATETGIIPNLIYVV

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

85.8

0.81

0.7

81.6

30.5

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

43.3

-0.4

2.3

67.41

42.7

Associated Gene:

Gene:

CHODL

Ensembl Gene ID:

ENSAPLG00000007788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029766

102610658 - 102647370

36713

ENSAPLT00000032865

102610658 - 102641514

30857

ENSAPLT00000025771

102610658 - 102650484

39827

ENSAPLT00000032720

102610658 - 102637907

27250

ENSAPLT00000008085

102610658 - 102635899

25242

ENSAPLT00000032671

102610658 - 102684329

73672

ENSAPLT00000031800

102610658 - 102684329

73672

ENSAPLT00000039525

102610658 - 102636208

25551