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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102633726_102636033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102633726 - 102636033

Intron Length:

2308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TCGTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCATGCTTAGAT

Flanking Amino Acid:

GTCCFQMLHKREARRNCFKD

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

84.7

0.78

0.8

76.9

37.3

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

49.4

0.04

2.1

70.07

46.3

Associated Gene:

Gene:

CHODL

Ensembl Gene ID:

ENSAPLG00000007788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039525

102610658 - 102636208

25551

ENSAPLT00000032720

102610658 - 102637907

27250