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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102647565_102649788_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

102647565 - 102649788

Intron Length:

2224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATGTTC

5'SS Class:

major

3'SS Sequence:

CTAAGCATTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

GAGCTCTTAAAT

Flanking Amino Acid:

WLVTAAHCVYGVMEWLYIFY

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

66.7

39.8

Major BPS

77.8

0.69

78.2

31.8

Major PPT

48.4

-0

1.7

55.1

44.3

Minor 5ss

40.9

-1

3.3

50.6

46.1

Minor BPS

59.5

0.38

1.4

68.76

41.4

Associated Gene:

Gene:

TMPRSS15

Ensembl Gene ID:

ENSAPLG00000007563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007888

102644326 - 102698651

54326