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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102663217_102663678_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

102663217 - 102663678

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGGAGAGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TTCTCCTGGAGA

Flanking Amino Acid:

DGRGPNSSLLAVYTGQGPLP

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.81

1.1

75.6

40.2

Major BPS

61.3

0.28

30.6

Major PPT

52.3

0.05

47.7

39.2

Minor 5ss

24.3

-3

3.5

36.8

Minor BPS

57.8

0.24

1.8

71.06

41.3

Associated Gene:

Gene:

TMPRSS15

Ensembl Gene ID:

ENSAPLG00000007563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007888

102644326 - 102698651

54326