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Intron Name: Anas_platyrhynchos_platyrhynchos_1_102672179_102674705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

102672179 - 102674705

Intron Length:

2527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

CATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TGCTCATTATTT

Flanking Amino Acid:

DFDHTFGNMSGFYISTPIGF

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

82.8

0.74

0.9

76.8

36.6

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

55.5

0.25

1.9

73.8

43.2

Associated Gene:

Gene:

TMPRSS15

Ensembl Gene ID:

ENSAPLG00000007563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007888

102644326 - 102698651

54326