Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_102720988_102792204_R

Intron Information:

Intron Rank:

146453

Intron Class:

major

Intron Phase:

Intron Coordinates:

102720988 - 102792204

Intron Length:

71217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

ATGCGTTCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

GCACCCTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

67.6

0.44

1.2

Major PPT

0.54

0.9

40.8

Minor 5ss

38.3

-1.3

2.8

51.5

Minor BPS

61.9

0.35

1.5

63.33

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031125

102713806 - 102793515

79710