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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1027469_1028041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1027469 - 1028041

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

TTTTCTAGAGCC

Flanking Amino Acid:

RDGRMINALIGMYPEDEWNL

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

59.9

0.25

1.3

70.1

Major PPT

70.3

0.46

0.8

62.6

33.6

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

0.01

1.9

72.45

38.4

Associated Gene:

Gene:

FBH1

Ensembl Gene ID:

ENSAPLG00000009754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010201

1009974 - 1030196

20223