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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10278329_10281895_F

Intron Information:

Intron Rank:

129969

Intron Class:

major

Intron Phase:

Intron Coordinates:

10278329 - 10281895

Intron Length:

3567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATACAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

28.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

37.8

-1.4

3.4

55.7

48.5

Minor BPS

43.2

-0.5

2.1

58.9

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046903

10278177 - 10297870

19694

ENSAPLT00000036341

10278177 - 10321191

43015

ENSAPLT00000027797

10278177 - 10322999

44823