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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10361212_10364284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10361212 - 10364284

Intron Length:

3073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

AACTGTGTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

38.6

Major BPS

72.5

0.56

1.2

63.4

Major PPT

89.5

0.89

0.6

87.9

22.1

Minor 5ss

42.5

-0.8

2.9

49.4

46.6

Minor BPS

45.9

-0.3

2.3

58.13

41.9

Associated Gene:

Gene:

SEMA3C

Ensembl Gene ID:

ENSAPLG00000003901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004111

10361110 - 10480991

119882