Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_103620153_103620414_R

Intron Information:

Intron Rank:

130436

Intron Class:

major

Intron Phase:

Intron Coordinates:

103620153 - 103620414

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCAG

5'SS Class:

major

3'SS Sequence:

GTCTTCAACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TCTTCTTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

55.8

44.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

68.2

0.41

62.1

37.7

Minor 5ss

31.3

-2.1

30.2

42.9

Minor BPS

60.2

0.4

1.9

79.65

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023347

103618650 - 103629831

11182

ENSAPLT00000017315

103618650 - 103629831

11182