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Intron Name: Anas_platyrhynchos_platyrhynchos_1_103988904_103992417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103988904 - 103992417

Intron Length:

3514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTTCCATTACT

Flanking Amino Acid:

DFRDIIVIVNVPPAITLPQK

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

93.8

0.99

0.6

92.5

25.7

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

71.3

0.75

1.9

93.77

33.6

Associated Gene:

Gene:

NCAM2

Ensembl Gene ID:

ENSAPLG00000009276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009743

103835041 - 104117295

282255

ENSAPLT00000043194

103835041 - 104090684

255644