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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10431763_10436573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10431763 - 10436573

Intron Length:

4811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCGT

5'SS Class:

major

3'SS Sequence:

GTAATCCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GCTTCTGTAATC

Flanking Amino Acid:

ECKMAGKDPTHGCGNFVRVI

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

66.8

44.5

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

0.45

59.3

42.6

Minor 5ss

38.1

-1.3

3.1

42.1

Minor BPS

55.5

0.15

66.24

40.3

Associated Gene:

Gene:

SEMA3C

Ensembl Gene ID:

ENSAPLG00000003901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004111

10361110 - 10480991

119882