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Intron Name: Anas_platyrhynchos_platyrhynchos_1_104384881_104417571_F

Intron Information:

Intron Rank:

131012

Intron Class:

major

Intron Phase:

Intron Coordinates:

104384881 - 104417571

Intron Length:

32691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTATTGGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

GTGTAAGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

66.9

0.38

1.1

63.7

41.5

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

45.1

-0.2

2.3

66.85

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030030

104384575 - 104426339

41765