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Intron Name: Anas_platyrhynchos_platyrhynchos_1_104419967_104422832_F

Intron Information:

Intron Rank:

131014

Intron Class:

major

Intron Phase:

Intron Coordinates:

104419967 - 104422832

Intron Length:

2866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CTGTTGTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

82.1

0.72

0.8

80.8

31.3

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

48.1

-0

2.1

67.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037429

104419571 - 104453815

34245

ENSAPLT00000030030

104384575 - 104426339

41765