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Intron Name: Anas_platyrhynchos_platyrhynchos_1_104431828_104453397_F

Intron Information:

Intron Rank:

131018

Intron Class:

major

Intron Phase:

Intron Coordinates:

104431828 - 104453397

Intron Length:

21570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACTC

5'SS Class:

strong_major

3'SS Sequence:

ATACCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTCCAATACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.6

0.53

0.9

66.6

34.6

Minor 5ss

35.9

-1.6

3.3

50.8

45.8

Minor BPS

45.6

-0.3

2.1

62.25

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037429

104419571 - 104453815

34245

ENSAPLT00000030844

104421208 - 104453815

32608