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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10444938_10446151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10444938 - 10446151

Intron Length:

1214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TACACTTTCATT

Flanking Amino Acid:

TDQHNSKWLSEPIFVDAHVI

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.6

0.71

0.8

78.4

34.1

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

52.6

0.16

1.8

69.24

42.3

Associated Gene:

Gene:

SEMA3C

Ensembl Gene ID:

ENSAPLG00000003901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004111

10361110 - 10480991

119882