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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10458794_10468432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10458794 - 10468432

Intron Length:

9639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTGTCTCATCT

Flanking Amino Acid:

GRYHVLFLGTDQGTVQKVVV

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

84.3

0.77

0.8

76.6

37.2

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

55.8

0.26

1.9

79.56

42.7

Associated Gene:

Gene:

SEMA3C

Ensembl Gene ID:

ENSAPLG00000003901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004111

10361110 - 10480991

119882