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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10468522_10470698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10468522 - 10470698

Intron Length:

2177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGGTTTGTAATT

Flanking Amino Acid:

LILEELEVFQSNSPITTMKI

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

42.6

-0.8

2.8

59.4

45.1

Minor BPS

52.4

0.15

71.32

40.7

Associated Gene:

Gene:

SEMA3C

Ensembl Gene ID:

ENSAPLG00000003901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004111

10361110 - 10480991

119882