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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10478515_10480462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10478515 - 10480462

Intron Length:

1948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

CATTCTTGAAAA

Flanking Amino Acid:

LQKDNDRRKEVKLNERIIAT

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

79.7

0.67

0.7

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

58.9

0.27

1.6

66.78

39.3

Associated Gene:

Gene:

SEMA3C

Ensembl Gene ID:

ENSAPLG00000003901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004111

10361110 - 10480991

119882