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Intron Name: Anas_platyrhynchos_platyrhynchos_1_104856269_104857271_F

Intron Information:

Intron Rank:

133436

Intron Class:

major

Intron Phase:

Intron Coordinates:

104856269 - 104857271

Intron Length:

1003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

TATTTTTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCTTCTTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

83.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.1

0.88

0.7

88.5

28.2

Minor 5ss

37.2

-1.4

2.9

49.2

40.8

Minor BPS

63.7

0.51

1.6

76.14

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027569

104856038 - 104859061

3024