Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_10506905_10507100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10506905 - 10507100

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTACTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTTTCTTGTACT

Flanking Amino Acid:

YVFPILWLNESAVIGDAKAE

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

88.3

26.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

76.9

0.6

73.2

41.9

Minor 5ss

35.7

-1.6

2.6

43.1

43.8

Minor BPS

67.5

0.63

1.8

88.92

35.6

Associated Gene:

Gene:

CD36

Ensembl Gene ID:

ENSAPLG00000004563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004725

10506032 - 10540154

34123