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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105333021_105333796_F

Intron Information:

Intron Rank:

135055

Intron Class:

major

Intron Phase:

Intron Coordinates:

105333021 - 105333796

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCATA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

GTTCTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

72.1

39.4

Major BPS

79.1

0.72

69.3

38.4

Major PPT

95.2

1.02

0.5

91.6

19.5

Minor 5ss

45.2

-0.5

2.9

63.3

Minor BPS

62.3

0.47

1.6

77.8

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020973

105330406 - 105348981

18576