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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105507787_105512912_R

Intron Information:

Intron Rank:

144620

Intron Class:

major

Intron Phase:

Intron Coordinates:

105507787 - 105512912

Intron Length:

5126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATACT

5'SS Class:

strong_major

3'SS Sequence:

AAAACTCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

82.9

28.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

61.3

0.25

0.9

56.4

39.9

Minor 5ss

32.3

-2

2.8

43.2

43.8

Minor BPS

53.8

0.2

1.9

77.35

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036033

105506629 - 105513062

6434