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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105595168_105596467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105595168 - 105596467

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

AATCACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATGTTTCAATC

Flanking Amino Acid:

NRLNDWQPTKDNFISLTKDA

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

74.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

70.9

0.47

0.9

66.9

39.2

Minor 5ss

41.4

-1

2.8

50.4

39.9

Minor BPS

52.6

0.06

1.6

62.78

37.4

Associated Gene:

Gene:

MRPL39

Ensembl Gene ID:

ENSAPLG00000010041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010470

105590477 - 105599904

9428