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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105634784_105636204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105634784 - 105636204

Intron Length:

1421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTGTCTTAACA

Flanking Amino Acid:

YTMNKKSGTLLFNTVTKNDT

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.6

0.62

0.9

73.2

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

74.7

0.77

1.3

78.35

38.8

Associated Gene:

Gene:

JAM2

Ensembl Gene ID:

ENSAPLG00000022073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018543

105626906 - 105637189

10284

ENSAPLT00000046714

105606595 - 105637189

30595

ENSAPLT00000039160

105606595 - 105637189

30595