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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105649070_105651209_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105649070 - 105651209

Intron Length:

2140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTACTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CTTTTGGTACTT

Flanking Amino Acid:

GTEKQECTEESIVEQTYTTA

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.4

33.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

66.8

0.38

1.1

69.4

40.8

Minor 5ss

-1.5

3.1

51.8

44.8

Minor BPS

41.5

-0.5

2.6

66.07

45.7

Associated Gene:

Gene:

GABPA

Ensembl Gene ID:

ENSAPLG00000009339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040375

105645775 - 105668608

22834

ENSAPLT00000022921

105648747 - 105682866

34120

ENSAPLT00000009767

105646761 - 105668608

21848