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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105651355_105651904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105651355 - 105651904

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

ACAACATTAAGA

Flanking Amino Acid:

AHEICLQDIQLDPDRSLFDQ

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

0.47

1.2

69.9

35.3

Major PPT

76.4

0.59

74.9

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

48.1

-0.1

1.9

56.76

41.9

Associated Gene:

Gene:

GABPA

Ensembl Gene ID:

ENSAPLG00000009339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009767

105646761 - 105668608

21848

ENSAPLT00000040375

105645775 - 105668608

22834

ENSAPLT00000022921

105648747 - 105682866

34120