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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105651990_105658293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105651990 - 105658293

Intron Length:

6304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TATCTACACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTGTTCTATCT

Flanking Amino Acid:

QLSVQVISRQGIEPKLNILE

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

64.2

0.32

0.9

56.2

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

49.3

0.03

75.57

41.7

Associated Gene:

Gene:

GABPA

Ensembl Gene ID:

ENSAPLG00000009339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009767

105646761 - 105668608

21848

ENSAPLT00000040375

105645775 - 105668608

22834

ENSAPLT00000022921

105648747 - 105682866

34120