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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105658540_105660484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105658540 - 105660484

Intron Length:

1945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATAATA

5'SS Class:

major

3'SS Sequence:

CCCCCCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

TCTCCCCCCACC

Flanking Amino Acid:

KEQERLGIPYDPVQWSTDQV

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

75.4

33.8

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

63.9

0.31

0.8

53.9

29.3

Minor 5ss

37.3

-1.4

46.5

42.9

Minor BPS

-0.4

2.2

61.15

43.9

Associated Gene:

Gene:

GABPA

Ensembl Gene ID:

ENSAPLG00000009339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040375

105645775 - 105668608

22834

ENSAPLT00000022921

105648747 - 105682866

34120

ENSAPLT00000009767

105646761 - 105668608

21848