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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105662687_105664071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105662687 - 105664071

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCT

5'SS Class:

major

3'SS Sequence:

CCTCTATCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

GCTACTTGAAAT

Flanking Amino Acid:

EDRSSPGNRTGNNGQIQLWQ

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.9

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

0.47

0.9

65.9

33.6

Minor 5ss

45.5

-0.5

3.1

65.8

45.4

Minor BPS

52.6

0.16

1.6

67.85

42.5

Associated Gene:

Gene:

GABPA

Ensembl Gene ID:

ENSAPLG00000009339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040375

105645775 - 105668608

22834

ENSAPLT00000022921

105648747 - 105682866

34120

ENSAPLT00000009767

105646761 - 105668608

21848