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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105664265_105668379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105664265 - 105668379

Intron Length:

4115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

MNYEKLSRALRYYYDGDMIC

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

GABPA

Ensembl Gene ID:

ENSAPLG00000009339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040375

105645775 - 105668608

22834

ENSAPLT00000022921

105648747 - 105682866

34120

ENSAPLT00000009767

105646761 - 105668608

21848