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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105714008_105731928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105714008 - 105731928

Intron Length:

17921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGGTGCAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

ATGACTTTAACC

Flanking Amino Acid:

DSVPANTENEGSGLTNVKTE

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

77.3

0.68

79.3

29.4

Major PPT

63.4

0.3

1.1

55.9

43.7

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

71.6

0.66

1.3

73.44

37.4

Associated Gene:

Gene:

APP

Ensembl Gene ID:

ENSAPLG00000008913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039466

105703206 - 105879124

175919