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Intron Name: Anas_platyrhynchos_platyrhynchos_1_105851201_105878956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105851201 - 105878956

Intron Length:

27756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTCTTTATAT

Flanking Amino Acid:

KEGILQYCQEVYPELQITNV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

72.6

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.7

0.56

75.5

38.4

Minor 5ss

37.2

-1.4

2.9

46.5

35.3

Minor BPS

64.6

0.54

1.7

80.79

41.2

Associated Gene:

Gene:

APP

Ensembl Gene ID:

ENSAPLG00000008913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039466

105703206 - 105879124

175919

ENSAPLT00000009304

105703206 - 105879124

175919

ENSAPLT00000009295

105703206 - 105879124

175919